CDS

Accession Number TCMCG019C32918
gbkey CDS
Protein Id XP_022964894.1
Location complement(join(1376958..1377350,1377833..1377991,1378112..1378214,1378367..1378447,1378726..1378802,1378886..1378957,1379065..1379141,1379924..1379984,1381138..1381235,1381930..1382037,1382861..1383147,1383255..1383320,1385115..1385194,1385694..1385863,1387426..1387457,1387579..1387739,1388006..1388158,1388288..1388352,1388435..1388566,1388923..1389029,1389537..1389660,1390047..1390125,1390385..1390484,1390818..1390900,1391434..1391484,1393099..1393569,1393973..1393987))
Gene LOC111464863
GeneID 111464863
Organism Cucurbita moschata

Protein

Length 1134aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA418582
db_source XM_023109126.1
Definition tRNA ligase 1 isoform X2 [Cucurbita moschata]

EGGNOG-MAPPER Annotation

COG_category S
Description atrnl,rnl
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000281        [VIEW IN EMBL-EBI]
GO:0000394        [VIEW IN EMBL-EBI]
GO:0000910        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003972        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006388        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008356        [VIEW IN EMBL-EBI]
GO:0008380        [VIEW IN EMBL-EBI]
GO:0008452        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009793        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010069        [VIEW IN EMBL-EBI]
GO:0010070        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016874        [VIEW IN EMBL-EBI]
GO:0016886        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042245        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051301        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0061640        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0140098        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCTTACAATCAGCGAAGGGGTGGTCGTAGAGAGCAGAAGTGGAAAGAGAAGGCAAAGGTTGAAGGAATTTCTACAGAGTCAGAAACTGCTTCTGAAGTTGTAACTAATGCACTCAGTAATTTGAGGGTTACTGAGAGTAATCAACCGCATATTCCTATTACAAGTGTGCAGTTTGGAAATGCCCAGCCTACAAACCTGGCCACCCCTGGGCTTGGTCATAGAGCAATTTGGAAACCAAAAGCTTATGGAACAACCAGTGGGGCTGCAGTGGTTGAAGGTGAAAAGGCACCTGCCGTTGGAACATCTATTGAAAACAAGGGGAGTAATGCTGAAATTGCTGCAAATAGCAGCGCCATTGCCTTGAGTCAATTACTTAAGGGCAATCAGATTGAACAGTTTACTGTGGATAATTCGGCATACACACAGGCACAGATAAGAGCTACATTCTACCCTAAATTTGAGAACGAGAAGTCGGATCAGGAGATTAGAACAAGGATGATAGAGATGGTGTCAAAAGGCTTGGCTACACTGGAGGTTTCACTAAAACACTCTGGGTCTTTGTTTATGTACGCTGGTCATCAGGGTGGAGCATATGCAAAAAACAGCTTCGGGAATATATACACTGCTGTTGGTGTCTTTGTTCTGGGAAGGATGTTTCGAGAGGCTTGGGGATCTGTAGCACCCAAAAAACAAGCAGAATTCAATGATTTCCTTGAGAGTAACCGTATGTGCATATCAATGGAGTTAGTAACTGCCGTTCTGGGAGATCATGGTCAGCGACCACGAGAGGATTATGTGGTAGTTACAGCAGTTACCGAACTGGGCAACGGAAAGCCGAAGTTCTATTCAACTTCAGAAATAATAGCTTTTTGTAGAAAGTGGCGCTTACCAACCAATCATGTTTGGTTATTCTCAAGCAGGAAATCAGTGACATCTTTTTTTGCTTCCTTTGATGCCCTATGTGAAGAAGGAACTGCTACAACAGTATGTAAGGCTCTTGATGAAGTTGCAGAAATATCTGTACCAGGCTCAAAAGATCATATAAAAGTGCAGGGTGAAATTCTTGAGGGTCTTGTGGCTCGTATGGTGAGCCACGAGAGTTCAAAACACATGGAGAAAGTATTGGAAGAATTTCCTGCTCTGCCATATAACGAAGGAGGTGGACTTGATTTGGGACCAAGCCTGAGGGAAATTTGTGCTGCAAATAGGTCAGATGAAAAACAGCAAATAAAAGCACTTCTTCAAAATGTGGGTAGTGCCTTTTGCCCTGATCATTCAGACTGGTATGGTGATTCCCACTCAAGAAATGCAGACAGATCTGTTGTATCAAAATTCTTACAAGCCAAGCCAGCTGATTTTTCCACCTCCAAATTACAGGAAATGGTTCGTCTAATGAGAGAAAGGCGTCTTCCAGCTGCCTTCAAATGCTATCACAACTTTCACAAAATTGGTTCCATATCAAATGACAACCTTTTCTATAAAATGGTCATTCATGTTCAAAGCGACTCTGCTTTTCGGCGATATCAAAAAGAAATGAGGCACAAGCCAGGGTTGTGGCCATTGTATCGAGGTTTTTTTGTTGACATTAATTTATTCAAAGAAAACAAGGAGAAGACTGCTGAGATAGTGAAAAGTAAAAACAATTTGATGGAGACTGAAGGCAATGGGACCGTGGGAAGAGATGGATTTGCTGATGAAGATGCAAATCTGATGATAAAACTGAAATTTCTTACATATAAGTTGCGGACTTTTTTGATTCGTAATGGTTTGTCAATTCTCTTCAAAGAAGGTTCAGCTGCATACAAGGCCTATTACTTGAGGCAAATGAAGTTGTGGGGTACATCATTTGGAAAACAAAGGGAGCTCAGCAAGATGCTTGACGAATGGGCTGTATACTTGAGGAGGAAGTACGGGAATAAACAACTGTCATCGTCTATCTATCTAAGTGAAGCTGAACCTTTTCTTGAACAGTATGCTAAGCGCAGTCCTCAGAATCAGGCTCTTATCGGATCTGCTGGAAATCTGGTTAGAGCAGAAGACTTCTTGGCTGTTGTCGAGGAAGGAATGGACGAAGAGGGTGATCTTCAGAAAGAGGACGCAGCACCATCAAGTCCTATGCTCTCTAGGAAGGATGTTGTGCCAAAAGCAGAGGGCTTAATTGTGTTTTTTCCAGGAATCCCAGGCTGTGCAAAGTCTGCTCTTTGCAGAGAGATACTTAATGCCCCGGGAGGACTTGGAGATGACCGACCAGTCAATACTCTAATGGGTGACCTGATTAAAGGAAGATATTGGCAGAAGGTTGCTGATGAGCGTCGGAGAAAACCATACTCCATAATGCTTGCAGACAAAAACGCACCAAATGAAGAAGTGTGGAGACAAATTGAAGATATGTGCCATAGCACAAGAGCCTCTGCAGTTCCAGTTATACCTGATTCTGAAGGAACTGATTCTAACCCTTTCTCCCTTGACGCACTGGCTGTGTTCATGTTCCGTGTGCTGCAAAGAGTTAACCATCCAGGAAATCTCGACAAGGCGTCCCCTAATGCAGGCTATGTCCTACTAATGTTTTATCACCTTTATGAGGGCAAGAGTCGTAGAGAGTTCGAAGGTGAGCTTATCGATCGTTTTGGGTCTCTGGTTAAGATTCCATTGCTGAAATCTGATAGGAGTCCTTTACCTGACAATTTGAAGACTATCTTAGAGGAAGGATTAAGTCTGTATAAGCTCCATACTAGTAGACATGGAAGGGCGGACTCTACTAAAGGTTCTTACGCGAAAGAATGGGCGAAATGGGAGAAGCAATTGCGAGAAACTTTGTTTGGTAACGCTGAGTATCTCAATGCTATTCAGGTTCCATTTGAGTTTGCTGTTCAAAATGTGTTGGAGCAATTAAAGAAGATTTCAAAGGGTGACTATAAAAGCCCTATTACAGAGAGGAGGAAGTCTGCGACCATAGTGTATGCTGCTGTCAGTCTTCCTGTTCAGGACATCCAAGATGCTCTCGACACGTTGGGCAACAAAAATCCTCAGGTTGAAGCATTCATTAAAGAAGGCTACAAGGATTACACACTTAAAAGCGCTCATGTCACACTCGCACACAAAAGAAGCCATGGCATTAAAGCTGTAGCTGACTACGGCATCTTCGAGAACAAAGAAGTTCCAGTTGAGCTGACAGCCCTACTTTTCTCAGATAAAATGGCTGCCTTCGAAGCTCGGGTTGGCAGCATTGAGGACGAAAGAGTGATTTCGAAAAATGAGTGGCCGCATGTAACATTATGGACTAGAGAAGGGATTGCAGCAAAAGAGGCCAACACATTACCACAGTTAGTATCAGAGGGGAAAGCAACTCTGGTGGAACTGAACCCTCCCATTATCATATCAGGCAAGGTGCAATTCTTTTAG
Protein:  
MPYNQRRGGRREQKWKEKAKVEGISTESETASEVVTNALSNLRVTESNQPHIPITSVQFGNAQPTNLATPGLGHRAIWKPKAYGTTSGAAVVEGEKAPAVGTSIENKGSNAEIAANSSAIALSQLLKGNQIEQFTVDNSAYTQAQIRATFYPKFENEKSDQEIRTRMIEMVSKGLATLEVSLKHSGSLFMYAGHQGGAYAKNSFGNIYTAVGVFVLGRMFREAWGSVAPKKQAEFNDFLESNRMCISMELVTAVLGDHGQRPREDYVVVTAVTELGNGKPKFYSTSEIIAFCRKWRLPTNHVWLFSSRKSVTSFFASFDALCEEGTATTVCKALDEVAEISVPGSKDHIKVQGEILEGLVARMVSHESSKHMEKVLEEFPALPYNEGGGLDLGPSLREICAANRSDEKQQIKALLQNVGSAFCPDHSDWYGDSHSRNADRSVVSKFLQAKPADFSTSKLQEMVRLMRERRLPAAFKCYHNFHKIGSISNDNLFYKMVIHVQSDSAFRRYQKEMRHKPGLWPLYRGFFVDINLFKENKEKTAEIVKSKNNLMETEGNGTVGRDGFADEDANLMIKLKFLTYKLRTFLIRNGLSILFKEGSAAYKAYYLRQMKLWGTSFGKQRELSKMLDEWAVYLRRKYGNKQLSSSIYLSEAEPFLEQYAKRSPQNQALIGSAGNLVRAEDFLAVVEEGMDEEGDLQKEDAAPSSPMLSRKDVVPKAEGLIVFFPGIPGCAKSALCREILNAPGGLGDDRPVNTLMGDLIKGRYWQKVADERRRKPYSIMLADKNAPNEEVWRQIEDMCHSTRASAVPVIPDSEGTDSNPFSLDALAVFMFRVLQRVNHPGNLDKASPNAGYVLLMFYHLYEGKSRREFEGELIDRFGSLVKIPLLKSDRSPLPDNLKTILEEGLSLYKLHTSRHGRADSTKGSYAKEWAKWEKQLRETLFGNAEYLNAIQVPFEFAVQNVLEQLKKISKGDYKSPITERRKSATIVYAAVSLPVQDIQDALDTLGNKNPQVEAFIKEGYKDYTLKSAHVTLAHKRSHGIKAVADYGIFENKEVPVELTALLFSDKMAAFEARVGSIEDERVISKNEWPHVTLWTREGIAAKEANTLPQLVSEGKATLVELNPPIIISGKVQFF